java.lang.Object
- picard.sam.SamErrorMetric.ReadBaseStratification.ConsensusStratifier

All Implemented Interfaces:

ReadBaseStratification.RecordAndOffsetStratifier<ReadBaseStratification.Consensus>

Enclosing class:

ReadBaseStratification
```
public static class ReadBaseStratification.ConsensusStratifier
extends Object
```
Stratify by tags used during duplex and single index consensus calling.

Constructor Summary

Constructors
Constructor Description

ConsensusStratifier()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`String`	`getSuffix()`
`ReadBaseStratification.Consensus`	`stratify(htsjdk.samtools.SAMRecord sam)`
`T`	`stratify(htsjdk.samtools.util.SamLocusIterator.RecordAndOffset recordAndOffset, htsjdk.samtools.reference.SamLocusAndReferenceIterator.SAMLocusAndReference locusInfo)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- ConsensusStratifier
```
public ConsensusStratifier()
```

Method Detail

stratify

public ReadBaseStratification.Consensus stratify(htsjdk.samtools.SAMRecord sam)

getSuffix
```
public String getSuffix()
```

stratify

public T stratify(htsjdk.samtools.util.SamLocusIterator.RecordAndOffset recordAndOffset,
                  htsjdk.samtools.reference.SamLocusAndReferenceIterator.SAMLocusAndReference locusInfo)

Specified by:: stratify in interface ReadBaseStratification.RecordAndOffsetStratifier<T extends Comparable<T>>

Class ReadBaseStratification.ConsensusStratifier

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

ConsensusStratifier

Method Detail

stratify

getSuffix

stratify