Package picard.illumina.parser.readers

Class BclIndexReader

  • public class BclIndexReader
extends Object
    Annoyingly, there are two different files with extension .bci in NextSeq output. This reader handles the file that contains virtual file pointers into a .bcl.bgzf file. After the header, there is a 64-bit record per tile.

    • Constructor Detail

      • BclIndexReader

        public BclIndexReader​(File bclFile)

    • Method Detail

      • getNumTiles

        public int getNumTiles()

      • get

        public long get​(int recordNumber)

      • getBciFile

        public File getBciFile()