************
ProDy Manual
************

.. only:: not rtd and html

    Welcome to the official ProDy documentation. You can read
    these pages in `PDF <ProDy.pdf>`_ format too.


.. only:: rtd and html

    This is a partial copy of ProDy documentation.  Please visit
    `ProDy Homepage <http://prody.csb.pitt.edu>`_ for complete
    documentation with tutorials.


.. toctree::
   :maxdepth: 1
   :glob:

   getprody
   apps/index
   reference/index
   devel/index
   release/index
   about/index

.. only:: html

   * :ref:`genindex`
   * :ref:`modindex`
   * :ref:`search`


.. only:: html

   :Release: |release|
   :Date: |today|